Changelog

Source: NEWS.md

netrankr 1.2.02022-09-26

• benchmark vignette is now reproducible with code and data from data-raw
• internal changes after JOSS submission

netrankr 1.1.12021-12-21

• removed hcl.colors due to backward compatibility for R <3.6 (#9)

netrankr 1.1.02021-09-03

• neighborhood_inclusion() can return a sparse matrix (Matrix package now imported)
• all functions support sparse matrices as inputs
• added summary method for netrankr_full objects
• added as.matrix method for netrankr_full objects to extract probability distributions
• changed to on.exit(par(op)) in plot functions
• all functions now through errors instead of warnings when the network is vertex transitive
• better error handling if the input is not as expected
• added legends to the default plot function for netrankr_full objects
• added legend to the default plot function for netrankr_mcmc objects
• changed default colors of the plot function for netrankr_interval objects to be more colorblind friendly

netrankr 1.0.02021-07-16

• added S3 class netrankr_full (result of exact_rank_prob()) with print and plot functions (#8)
• added S3 class netrankr_interval (result of rank_intervals()) with print and plot functions (#8)
• added S3 class netrankr_mcmc (result of mcmc_rank_prob()) with print and plot functions (#8)
• added dbces11 graph (smallest graph with 5 different centers)
• plot_rank_intervals() is now deprecated
• ggplot2 no longer suggested

netrankr 0.3.02020-09-09

• extended majorization_gap() to unconnected graphs
• added incomparable_pairs()

netrankr 0.2.12018-09-18

• fixed a bug in index_builder which prevented the building of self defined indices
• fixed a still existing bug in transitive_reduction()
• added type = weights in indirect_relations()
• type = "identity" in indirect_relations() is now deprecated. Use type = "adjacency" instead.
• type = "weight" added to indirect_relations() to return the weighted adjacency matrix
• vertex names are now properly added as column and rownames to matrices produced by indirect_relations() and exact_rank_prob().

netrankr 0.2.02018-01-08

• added Rstudio addin to build more than 20 centrality indices
• added indirect relations: dist_lf,dist_walk, depend_netflow, depend_exp, depend_rsps, depend_rspn, depend_curflow, dist_rwalk, dist_walk
• API breaking: changed “dependencies” to “depend_sp” in indirect_relations()
• API breaking: changed “geodesic” to “dist_sp” in indirect_relations()
• API breaking: changed “resistance” to “dist_resist” in indirect_relations()
• The above old types still work in this version
• changed require to library in examples

netrankr 0.1.1

• fixed a bug in transitive_reduction()
• fixed some errors in the documentation of exact_rank_prob()
• rephrasing of some strong statements

netrankr 0.1.0

• first public release

netrankr 0.0.5

• most function reimplemented in C++ for efficiency.
• vignettes added: browseVignettes("netrankr")
• added visualization function plot_rank_intervals()
• spell checked and extended help

netrankr 0.0.1-0.0.4

initial builds, predominantely written in R.